Objective To study the feasibility of quantitative detection of endotoxin content in inactivated enterovirus 71 vaccine (iEV71) by micro-dynamic chromogenic assay. Methods The reliability verification of standard curve, interference test and detection of 3 batches of final product were carried out by micro-dynamic chromogenic assay. The results were compared with those of gel method. Results In the reliability verification of the standard curve, the linear range was 0.005 0-5.000 0 endotoxin unit (EU)/ml, and the standard curve had good linearity with coefficient of determination at 0.999. The interference test result showed that the recovery rate was 94.4% when the test sample was diluted 10 times and 0.5 EU/ml standard endotoxin was added. The recovery rate met the requirement of 50%-200% indicating that the test sample did not interfere with the reaction at this dilution ratio. In addition, the results for 3 batches of final product met the requirements of the standard limit and were consistent with the gel method test results. Conclusion The micro-dynamic chromogenic assay can be used for quantitative detection of endotoxin in the final product of iEV71.