Objective To optimize polyethylenimine linear (PEI)-mediated high-efficiency transient transfection conditions to improve the transient expression efficiency of recombinant proteins in human embryonic kidney (HEK)293F suspension cells. Methods The recombinant plasmid enhanced green fluorescent protein (EGFP)/pcDNA3.1+ was constructed and identified. The recombinant plasmid was transfected into HEK293F cells by transient transfection for expression. The ratio of transfection reagent PEI to recombinant plasmid and the harvesting time were optimised, and the expression of target protein was determined by inverted microscopy, SDS-PAGE and flow cytometry to determine the optimal expression conditions of the target protein in HEK293F cells. The optimized conditions were expanded in T500 (working volume 120 ml) shake flasks. Results The recombinant plasmid EGFP/pcDNA3.1+ constructed was correct. The highest expression of target protein was obtained 4 d after transfection at 3.0 μg/ml recombinant plasmid concentration, DNA ∶PEI of 2∶1 and a final concentration of 2 mmol/L valproic acid sodium salt added 24 h after transfection. This condition was also suitable for transient transfections with an enlarged culture volume of T500. Conclusion A rapid and effective PEI-based transient transfection method is optimized to prepare recombinant proteins for high-level expression.